Improved the genetic analysis creation process in various ways. Recombination breakpoints are more accurately predicted now.
This commit is contained in:
Simon Sarasova
parent
497f596b3b
commit
ee976f49b3
5 changed files with 874 additions and 587 deletions
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@ -6,6 +6,7 @@ Small and insignificant changes may not be included in this log.
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## Unversioned Changes
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* Improved the genetic analysis creation process in various ways. Recombination breakpoints are more accurately predicted now. - *Simon Sarasova*
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* Improved the identity hash generation tool. The fastest quantity of goroutines is now identified and used. - *Simon Sarasova*
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* Improved the creation procedures, encoding format, and graphical presentation of genetic analyses. Map lists have been replaced by custom objects. - *Simon Sarasova*
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* Upgraded Circl to version 1.3.8. - *Simon Sarasova*
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@ -9,4 +9,4 @@ Many other people have written code for modules which are imported by Seekia. Th
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Name | Date Of First Commit | Number Of Commits
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--- | --- | ---
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Simon Sarasova | June 13, 2023 | 249
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Simon Sarasova | June 13, 2023 | 250
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@ -20,6 +20,7 @@ import "seekia/internal/appMemory"
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import "seekia/internal/encoding"
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import "seekia/internal/genetics/companyAnalysis"
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import "seekia/internal/genetics/createGeneticAnalysis"
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import "seekia/internal/genetics/locusValue"
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import "seekia/internal/genetics/myChosenAnalysis"
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import "seekia/internal/genetics/myPeople"
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import "seekia/internal/genetics/readGeneticAnalysis"
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@ -3349,7 +3350,7 @@ func setViewMateProfilePage_PolygenicDiseaseLoci(window fyne.Window, diseaseName
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}
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userLocusBase1, userLocusBase2, semicolonExists := strings.Cut(userLocusBasePair, ";")
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if (semicolonExists == true){
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if (semicolonExists == false){
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return false, 0, false, "", errors.New("Database corrupt: Contains profile with invalid " + locusName + " value: " + userLocusBasePair)
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}
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@ -3659,94 +3660,46 @@ func setViewMateProfilePage_GeneticTraits(window fyne.Window, userOrOffspring st
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myTraitLocusValuesMap, _, _, _, _, err := readGeneticAnalysis.GetPersonTraitInfoFromGeneticAnalysis(myAnalysisObject, traitName, myGenomeIdentifier)
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if (err != nil) { return false, nil, 0, err }
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offspringTraitOutcomeScoresMap := make(map[string]float64)
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offspringNumberOfRulesTested := 0
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// We construct the user's trait locus values map
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// Map Structure: Locus rsID -> locusValue.LocusValue
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userTraitLocusValuesMap := make(map[int64]locusValue.LocusValue)
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for _, traitRuleObject := range traitRulesList{
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traitLociList := traitObject.LociList
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ruleLociList := traitRuleObject.LociList
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for _, rsID := range traitLociList{
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//Outputs:
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// -bool: Probability is known
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// -float64: Offspring probability of passing rule
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// -error
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getOffspringProbabilityOfPassingRule := func()(bool, float64, error){
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rsIDString := helpers.ConvertInt64ToString(rsID)
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offspringProbabilityOfPassingRule := float64(1)
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userLocusValueAttributeName := "LocusValue_rs" + rsIDString
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for _, ruleLocusObject := range ruleLociList{
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locusRSID := ruleLocusObject.LocusRSID
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locusRSIDString := helpers.ConvertInt64ToString(locusRSID)
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userLocusValueAttributeName := "LocusValue_rs" + locusRSIDString
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userLocusBasePairIsKnown, _, userLocusBasePair, err := getAnyUserProfileAttributeFunction(userLocusValueAttributeName)
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if (err != nil) { return false, 0, err }
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if (userLocusBasePairIsKnown == false){
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// We must know all rule loci base pairs to determine offspring probability of passing rule
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return false, 0, nil
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}
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userLocusBase1, userLocusBase2, semicolonExists := strings.Cut(userLocusBasePair, ";")
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if (semicolonExists == false){
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return false, 0, errors.New("Database corrupt: Contains profile with invalid " + userLocusValueAttributeName + ": " + userLocusBasePair)
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}
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myLocusValue, myLocusValueIsKnown := myTraitLocusValuesMap[locusRSID]
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if (myLocusValueIsKnown == false){
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// We must know all rule loci base pairs to determine offspring probability of passing rule
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return false, 0, nil
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}
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myLocusBase1 := myLocusValue.Base1Value
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myLocusBase2 := myLocusValue.Base2Value
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locusRequiredBasePairsList := ruleLocusObject.BasePairsList
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offspringProbabilityOfPassingRuleLocus, err := createGeneticAnalysis.GetOffspringTraitRuleLocusInfo(locusRequiredBasePairsList, userLocusBase1, userLocusBase2, myLocusBase1, myLocusBase2)
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if (err != nil) { return false, 0, err }
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offspringProbabilityOfPassingRule *= offspringProbabilityOfPassingRuleLocus
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}
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return true, offspringProbabilityOfPassingRule, nil
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}
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offspringProbabilityOfPassingRuleKnown, offspringProbabilityOfPassingRule, err := getOffspringProbabilityOfPassingRule()
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userLocusBasePairIsKnown, _, userLocusBasePair, err := getAnyUserProfileAttributeFunction(userLocusValueAttributeName)
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if (err != nil) { return false, nil, 0, err }
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if (offspringProbabilityOfPassingRuleKnown == false){
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if (userLocusBasePairIsKnown == false){
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continue
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}
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offspringNumberOfRulesTested += 1
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ruleOutcomePointsMap := traitRuleObject.OutcomePointsMap
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for traitOutcome, pointsEffect := range ruleOutcomePointsMap{
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pointsToAdd := float64(pointsEffect) * offspringProbabilityOfPassingRule
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offspringTraitOutcomeScoresMap[traitOutcome] += pointsToAdd
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userLocusBase1, userLocusBase2, semicolonFound := strings.Cut(userLocusBasePair, ";")
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if (semicolonFound == false){
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return false, nil, 0, errors.New("Database corrupt: Contains profile with invalid " + userLocusValueAttributeName + " value: " + userLocusBasePair)
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}
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userLocusValue := locusValue.LocusValue{
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Base1Value: userLocusBase1,
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Base2Value: userLocusBase2,
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//TODO: Share LocusIsPhased information in user profiles and retrieve it into this value
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LocusIsPhased: false,
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}
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userTraitLocusValuesMap[rsID] = userLocusValue
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}
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if (offspringNumberOfRulesTested == 0){
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anyRuleTested, offspringNumberOfRulesTested, _, offspringAverageOutcomeScoresMap, err := createGeneticAnalysis.GetOffspringTraitInfo(traitObject, myTraitLocusValuesMap, userTraitLocusValuesMap)
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if (err != nil) { return false, nil, 0, err }
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if (anyRuleTested == false){
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return false, nil, 0, nil
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}
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traitOutcomesList := traitObject.OutcomesList
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// We add all outcomes for which there were no points
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for _, traitOutcome := range traitOutcomesList{
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_, exists := offspringTraitOutcomeScoresMap[traitOutcome]
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if (exists == false){
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offspringTraitOutcomeScoresMap[traitOutcome] = 0
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}
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}
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return true, offspringTraitOutcomeScoresMap, offspringNumberOfRulesTested, nil
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return true, offspringAverageOutcomeScoresMap, offspringNumberOfRulesTested, nil
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}
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if (userOrOffspring == "User"){
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@ -3903,11 +3856,103 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
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traitNameRow := container.NewHBox(layout.NewSpacer(), traitNameLabel, traitNameText, viewTraitInfoButton, layout.NewSpacer())
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//Outputs:
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// -bool: Any trait locus value exists for this myself
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// -map[int64]locusValue.LocusValue: My locus values map
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// -error
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getMyTraitLocusValuesMap := func()(bool, map[int64]locusValue.LocusValue, error){
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myPersonChosen, myGenomesExist, myAnalysisIsReady, myAnalysisObject, myGenomeIdentifier, _, err := myChosenAnalysis.GetMyChosenMateGeneticAnalysis()
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if (err != nil) { return false, nil, err }
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if (myPersonChosen == false || myGenomesExist == false || myAnalysisIsReady == false){
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// Without my genome person chosen, all offspring rule probabilities are unknown
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return false, nil, nil
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}
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myTraitLocusValuesMap, _, _, _, _, err := readGeneticAnalysis.GetPersonTraitInfoFromGeneticAnalysis(myAnalysisObject, traitName, myGenomeIdentifier)
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if (err != nil) { return false, nil, err }
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if (len(myTraitLocusValuesMap) == 0){
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return false, nil, nil
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}
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return true, myTraitLocusValuesMap, nil
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}
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anyMyTraitLocusValuesExist, myTraitLocusValuesMap, err := getMyTraitLocusValuesMap()
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if (err != nil){
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setErrorEncounteredPage(window, err, previousPage)
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return
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}
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traitObject, err := traits.GetTraitObject(traitName)
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if (err != nil){
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setErrorEncounteredPage(window, err, previousPage)
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return
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}
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traitLociList := traitObject.LociList
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traitRulesList := traitObject.RulesList
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//Outputs:
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// -bool: Any trait locus value exists for this user
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// -map[int64]locusValue.LocusValue: User locus values map
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// -error
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getUserTraitLocusValuesMap := func()(bool, map[int64]locusValue.LocusValue, error){
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// We construct the user's trait locus values map
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// Map Structure: Locus rsID -> locusValue.LocusValue
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userTraitLocusValuesMap := make(map[int64]locusValue.LocusValue)
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for _, rsID := range traitLociList{
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rsIDString := helpers.ConvertInt64ToString(rsID)
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userLocusValueAttributeName := "LocusValue_rs" + rsIDString
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userLocusBasePairIsKnown, _, userLocusBasePair, err := getAnyUserProfileAttributeFunction(userLocusValueAttributeName)
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if (err != nil) { return false, nil, err }
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if (userLocusBasePairIsKnown == false){
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continue
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}
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userLocusBase1, userLocusBase2, semicolonFound := strings.Cut(userLocusBasePair, ";")
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if (semicolonFound == false){
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return false, nil, errors.New("Database corrupt: Contains profile with invalid " + userLocusValueAttributeName + " value: " + userLocusBasePair)
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}
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userLocusValue := locusValue.LocusValue{
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Base1Value: userLocusBase1,
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Base2Value: userLocusBase2,
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//TODO: Share LocusIsPhased information in user profiles and retrieve it into this value
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LocusIsPhased: false,
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}
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userTraitLocusValuesMap[rsID] = userLocusValue
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}
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if (len(userTraitLocusValuesMap) == 0){
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return false, nil, nil
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}
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return true, userTraitLocusValuesMap, nil
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}
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anyUserTraitLocusValueExists, userTraitLocusValuesMap, err := getUserTraitLocusValuesMap()
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if (err != nil){
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setErrorEncounteredPage(window, err, previousPage)
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return
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}
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//Outputs:
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// -bool: Status is known
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// -bool: User passes rule
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// -error
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getUserPassesRuleBool := func(ruleIdentifier string, ruleLociList []traits.RuleLocus)(bool, bool, error){
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getUserPassesRuleBool := func(ruleLociList []traits.RuleLocus)(bool, bool, error){
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if (anyUserTraitLocusValueExists == false){
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return false, false, nil
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}
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allRuleLociKnown := true
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@ -3915,19 +3960,19 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
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locusRSID := ruleLocusObject.LocusRSID
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locusRSIDString := helpers.ConvertInt64ToString(locusRSID)
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userLocusValueAttributeName := "LocusValue_rs" + locusRSIDString
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userLocusBasePairIsKnown, _, userLocusBasePair, err := getAnyUserProfileAttributeFunction(userLocusValueAttributeName)
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if (err != nil) { return false, false, err }
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if (userLocusBasePairIsKnown == false){
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userLocusValue, userLocusValueIsKnown := userTraitLocusValuesMap[locusRSID]
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if (userLocusValueIsKnown == false){
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// We know rule is not passed
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// We keep searching to see if ruleIsPassed status is No or Unknown
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allRuleLociKnown = false
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continue
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continue
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}
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userLocusBase1Value := userLocusValue.Base1Value
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userLocusBase2Value := userLocusValue.Base2Value
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userLocusBasePair := userLocusBase1Value + ";" + userLocusBase2Value
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ruleLocusBasePairsList := ruleLocusObject.BasePairsList
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userPassesRuleLocus := slices.Contains(ruleLocusBasePairsList, userLocusBasePair)
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@ -3943,103 +3988,54 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
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return true, true, nil
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}
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myPersonChosen, myGenomesExist, myAnalysisIsReady, myAnalysisObject, myGenomeIdentifier, _, err := myChosenAnalysis.GetMyChosenMateGeneticAnalysis()
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//Outputs:
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// -bool: Any offspring probability of passing rule is known
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// -map[[3]byte]int: Offspring probability of passing rules map
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// Map Structure: Rule Identifier -> Probability offspring will pass rule (0-100%)
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// -error
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getOffspringProbabilityOfPassingRulesMap := func()(bool, map[[3]byte]int, error){
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if (anyMyTraitLocusValuesExist == false || anyUserTraitLocusValueExists == false){
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return false, nil, nil
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}
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anyOffspringRulesTested, _, offspringProbabilityOfPassingRulesMap, _, err := createGeneticAnalysis.GetOffspringTraitInfo(traitObject, myTraitLocusValuesMap, userTraitLocusValuesMap)
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if (err != nil) { return false, nil, err }
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if (anyOffspringRulesTested == false){
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return false, nil, nil
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}
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return true, offspringProbabilityOfPassingRulesMap, nil
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}
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anyOffspringProbabilityOfPassingRuleIsKnown, offspringProbabilityOfPassingRulesMap, err := getOffspringProbabilityOfPassingRulesMap()
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if (err != nil) {
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setErrorEncounteredPage(window, err, previousPage)
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return
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}
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//Outputs:
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// -bool: Probability is known
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// -int: Probability of passing rule (0-100)
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// -error
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getOffspringProbabilityOfPassingRule := func(ruleIdentifier string, ruleLociList []traits.RuleLocus)(bool, int, error){
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if (myPersonChosen == false || myGenomesExist == false || myAnalysisIsReady == false){
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// Without my genome person chosen, all offspring rule probabilities are unknown
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return false, 0, nil
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}
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myTraitLocusValuesMap, _, _, _, _, err := readGeneticAnalysis.GetPersonTraitInfoFromGeneticAnalysis(myAnalysisObject, traitName, myGenomeIdentifier)
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if (err != nil) { return false, 0, err }
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offspringProbabilityOfPassingRule := float64(1)
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for _, ruleLocusObject := range ruleLociList{
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locusRSID := ruleLocusObject.LocusRSID
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locusRSIDString := helpers.ConvertInt64ToString(locusRSID)
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userLocusValueAttributeName := "LocusValue_rs" + locusRSIDString
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userLocusBasePairIsKnown, _, userLocusBasePair, err := getAnyUserProfileAttributeFunction(userLocusValueAttributeName)
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if (err != nil) { return false, 0, err }
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if (userLocusBasePairIsKnown == false){
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// We must know all rule loci base pairs to determine offspring probability of passing rule
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return false, 0, nil
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}
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userLocusBase1, userLocusBase2, semicolonExists := strings.Cut(userLocusBasePair, ";")
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if (semicolonExists == false){
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return false, 0, errors.New("Database corrupt: Contains profile with invalid: " + userLocusValueAttributeName + ": " + userLocusBasePair)
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}
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myLocusValue, myLocusValueIsKnown := myTraitLocusValuesMap[locusRSID]
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if (myLocusValueIsKnown == false){
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// We must know all rule loci base pairs to determine offspring probability of passing rule
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return false, 0, nil
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}
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myLocusBase1 := myLocusValue.Base1Value
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myLocusBase2 := myLocusValue.Base2Value
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locusRequiredBasePairsList := ruleLocusObject.BasePairsList
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offspringProbabilityOfPassingRuleLocus, err := createGeneticAnalysis.GetOffspringTraitRuleLocusInfo(locusRequiredBasePairsList, userLocusBase1, userLocusBase2, myLocusBase1, myLocusBase2)
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if (err != nil) { return false, 0, err }
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offspringProbabilityOfPassingRule *= offspringProbabilityOfPassingRuleLocus
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}
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offspringPercentageProbabilityOfPassingRule := int(offspringProbabilityOfPassingRule * 100)
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return true, offspringPercentageProbabilityOfPassingRule, nil
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}
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traitObject, err := traits.GetTraitObject(traitName)
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if (err != nil){
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setErrorEncounteredPage(window, err, previousPage)
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return
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}
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traitRulesList := traitObject.RulesList
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totalNumberOfTraitRules := len(traitRulesList)
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getNumberOfRulesTested := func()(int, error){
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if (userOrOffspring == "Offspring"){
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if (anyOffspringProbabilityOfPassingRuleIsKnown == false){
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return 0, nil
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}
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numberOfRulesTested := len(offspringProbabilityOfPassingRulesMap)
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return numberOfRulesTested, nil
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}
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numberOfRulesTested := 0
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for _, ruleObject := range traitRulesList{
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ruleIdentifier := ruleObject.RuleIdentifier
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ruleLociList := ruleObject.LociList
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if (userOrOffspring == "User"){
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ruleStatusIsKnown, _, err := getUserPassesRuleBool(ruleIdentifier, ruleLociList)
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if (err != nil) { return 0, err }
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if (ruleStatusIsKnown == true){
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numberOfRulesTested += 1
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}
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} else if (userOrOffspring == "Offspring"){
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ruleProbabilityIsKnown, _, err := getOffspringProbabilityOfPassingRule(ruleIdentifier, ruleLociList)
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if (err != nil) { return 0, err }
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if (ruleProbabilityIsKnown == true){
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numberOfRulesTested += 1
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}
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ruleStatusIsKnown, _, err := getUserPassesRuleBool(ruleLociList)
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if (err != nil) { return 0, err }
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if (ruleStatusIsKnown == true){
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numberOfRulesTested += 1
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}
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}
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@ -4054,6 +4050,7 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
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|
||||
rulesTestedLabel := widget.NewLabel("Rules Tested:")
|
||||
|
||||
totalNumberOfTraitRules := len(traitRulesList)
|
||||
numberOfRulesTestedString := helpers.ConvertIntToString(numberOfRulesTested)
|
||||
totalNumberOfTraitRulesString := helpers.ConvertIntToString(totalNumberOfTraitRules)
|
||||
|
||||
|
|
@ -4119,12 +4116,16 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
|
|||
|
||||
for _, ruleObject := range traitRulesList{
|
||||
|
||||
ruleIdentifier := ruleObject.RuleIdentifier
|
||||
ruleIdentifierHex := ruleObject.RuleIdentifier
|
||||
|
||||
ruleIdentifier, err := encoding.DecodeHexStringTo3ByteArray(ruleIdentifierHex)
|
||||
if (err != nil) { return nil, err }
|
||||
|
||||
ruleLociList := ruleObject.LociList
|
||||
|
||||
getUserPassesRuleString := func()(string, error){
|
||||
|
||||
userRuleStatusIsKnown, userPassesRule, err := getUserPassesRuleBool(ruleIdentifier, ruleLociList)
|
||||
userRuleStatusIsKnown, userPassesRule, err := getUserPassesRuleBool(ruleLociList)
|
||||
if (err != nil) { return "", err }
|
||||
|
||||
if (userRuleStatusIsKnown == false){
|
||||
|
|
@ -4141,12 +4142,17 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
|
|||
|
||||
getOffspringProbabilityOfPassingRuleString := func()(string, error){
|
||||
|
||||
probabilityIsKnown, probabilityOfPassingRule, err := getOffspringProbabilityOfPassingRule(ruleIdentifier, ruleLociList)
|
||||
if (err != nil) { return "", err }
|
||||
if (anyOffspringProbabilityOfPassingRuleIsKnown == false){
|
||||
result := translate("Unknown")
|
||||
return result, nil
|
||||
}
|
||||
|
||||
probabilityOfPassingRule, probabilityIsKnown := offspringProbabilityOfPassingRulesMap[ruleIdentifier]
|
||||
if (probabilityIsKnown == false){
|
||||
result := translate("Unknown")
|
||||
return result, nil
|
||||
}
|
||||
|
||||
ruleProbabilityString := helpers.ConvertIntToString(probabilityOfPassingRule)
|
||||
|
||||
ruleProbabilityFormatted := ruleProbabilityString + "%"
|
||||
|
|
@ -4160,9 +4166,9 @@ func setViewMateProfilePage_TraitRules(window fyne.Window, traitName string, use
|
|||
// We do this because the rule effects column may be multiple rows tall
|
||||
|
||||
viewRuleInfoButton := widget.NewButtonWithIcon("", theme.InfoIcon(), func(){
|
||||
setViewTraitRuleDetailsPage(window, traitName, ruleIdentifier, currentPage)
|
||||
setViewTraitRuleDetailsPage(window, traitName, ruleIdentifierHex, currentPage)
|
||||
})
|
||||
ruleIdentifierLabel := getBoldLabelCentered(ruleIdentifier)
|
||||
ruleIdentifierLabel := getBoldLabelCentered(ruleIdentifierHex)
|
||||
userPassesRuleLabel := getBoldLabelCentered(userPassesRuleString)
|
||||
offspringProbabilityOfPassingRuleLabel := getBoldLabelCentered(offspringProbabilityOfPassingRuleString)
|
||||
|
||||
|
|
|
|||
File diff suppressed because it is too large
Load diff
|
|
@ -320,72 +320,75 @@ func GetLocusMetadataObjectsListByChromosome(chromosome int)([]LocusMetadata, er
|
|||
// -[]byte: File bytes
|
||||
getFileBytes := func()(bool, []byte){
|
||||
|
||||
if (chromosome == 1){
|
||||
return true, LocusMetadataFile_Chromosome1
|
||||
}
|
||||
if (chromosome == 2){
|
||||
return true, LocusMetadataFile_Chromosome2
|
||||
}
|
||||
if (chromosome == 3){
|
||||
return true, LocusMetadataFile_Chromosome3
|
||||
}
|
||||
if (chromosome == 4){
|
||||
return true, LocusMetadataFile_Chromosome4
|
||||
}
|
||||
if (chromosome == 5){
|
||||
return true, LocusMetadataFile_Chromosome5
|
||||
}
|
||||
if (chromosome == 6){
|
||||
return true, LocusMetadataFile_Chromosome6
|
||||
}
|
||||
if (chromosome == 7){
|
||||
return true, LocusMetadataFile_Chromosome7
|
||||
}
|
||||
if (chromosome == 8){
|
||||
return true, LocusMetadataFile_Chromosome8
|
||||
}
|
||||
if (chromosome == 9){
|
||||
return true, LocusMetadataFile_Chromosome9
|
||||
}
|
||||
if (chromosome == 10){
|
||||
return true, LocusMetadataFile_Chromosome10
|
||||
}
|
||||
if (chromosome == 11){
|
||||
return true, LocusMetadataFile_Chromosome11
|
||||
}
|
||||
if (chromosome == 12){
|
||||
return true, LocusMetadataFile_Chromosome12
|
||||
}
|
||||
if (chromosome == 13){
|
||||
return true, LocusMetadataFile_Chromosome13
|
||||
}
|
||||
if (chromosome == 14){
|
||||
return true, LocusMetadataFile_Chromosome14
|
||||
}
|
||||
if (chromosome == 15){
|
||||
return true, LocusMetadataFile_Chromosome15
|
||||
}
|
||||
if (chromosome == 16){
|
||||
return true, LocusMetadataFile_Chromosome16
|
||||
}
|
||||
if (chromosome == 17){
|
||||
return true, LocusMetadataFile_Chromosome17
|
||||
}
|
||||
//if (chromosome == 18){
|
||||
// return true, LocusMetadataFile_Chromosome18
|
||||
//}
|
||||
if (chromosome == 19){
|
||||
return true, LocusMetadataFile_Chromosome19
|
||||
}
|
||||
if (chromosome == 20){
|
||||
return true, LocusMetadataFile_Chromosome20
|
||||
}
|
||||
if (chromosome == 21){
|
||||
return true, LocusMetadataFile_Chromosome21
|
||||
}
|
||||
if (chromosome == 22){
|
||||
return true, LocusMetadataFile_Chromosome22
|
||||
switch chromosome{
|
||||
case 1:{
|
||||
return true, LocusMetadataFile_Chromosome1
|
||||
}
|
||||
case 2:{
|
||||
return true, LocusMetadataFile_Chromosome2
|
||||
}
|
||||
case 3:{
|
||||
return true, LocusMetadataFile_Chromosome3
|
||||
}
|
||||
case 4:{
|
||||
return true, LocusMetadataFile_Chromosome4
|
||||
}
|
||||
case 5:{
|
||||
return true, LocusMetadataFile_Chromosome5
|
||||
}
|
||||
case 6:{
|
||||
return true, LocusMetadataFile_Chromosome6
|
||||
}
|
||||
case 7:{
|
||||
return true, LocusMetadataFile_Chromosome7
|
||||
}
|
||||
case 8:{
|
||||
return true, LocusMetadataFile_Chromosome8
|
||||
}
|
||||
case 9:{
|
||||
return true, LocusMetadataFile_Chromosome9
|
||||
}
|
||||
case 10:{
|
||||
return true, LocusMetadataFile_Chromosome10
|
||||
}
|
||||
case 11:{
|
||||
return true, LocusMetadataFile_Chromosome11
|
||||
}
|
||||
case 12:{
|
||||
return true, LocusMetadataFile_Chromosome12
|
||||
}
|
||||
case 13:{
|
||||
return true, LocusMetadataFile_Chromosome13
|
||||
}
|
||||
case 14:{
|
||||
return true, LocusMetadataFile_Chromosome14
|
||||
}
|
||||
case 15:{
|
||||
return true, LocusMetadataFile_Chromosome15
|
||||
}
|
||||
case 16:{
|
||||
return true, LocusMetadataFile_Chromosome16
|
||||
}
|
||||
case 17:{
|
||||
return true, LocusMetadataFile_Chromosome17
|
||||
}
|
||||
//case 18:{
|
||||
// return true, LocusMetadataFile_Chromosome18
|
||||
//}
|
||||
case 19:{
|
||||
return true, LocusMetadataFile_Chromosome19
|
||||
}
|
||||
case 20:{
|
||||
return true, LocusMetadataFile_Chromosome20
|
||||
}
|
||||
case 21:{
|
||||
return true, LocusMetadataFile_Chromosome21
|
||||
}
|
||||
case 22:{
|
||||
return true, LocusMetadataFile_Chromosome22
|
||||
}
|
||||
}
|
||||
|
||||
return false, nil
|
||||
}
|
||||
|
||||
|
|
|
|||
Loading…
Reference in a new issue